The results are out and the first round is a shocker. What was the panel thinking? KT/V beating depression was a shock to me but just shows how obsessed nephrologists are with numbers. But it was the choice of podocytopathies over ciliopathies that really pushed me over the edge – there’s NephMadness and then there’s just crazy behavior!
The primary cilium is an unassuming structure, its tiny hairlike form apparently no match for better known and more loved podocytes. Ciliopathies are not merely an expanding group of conditions, they are a disease group in which clinical genetic testing, research level genetic testing and functional genomics are dramatically broadening our knowledge base. As it becomes apparent that phenotypically disparate conditions, from isolated retinitis pigmentosa to Bardet-Bieldel syndrome, can result from mutations in the same gene, the importance of understanding the structure and function of the primary cilium becomes increasingly obvious.
Conversely, that disparate genetic mutations affecting different proteins can cause identical multi-system phenotypes, such as Joubert syndrome, has changed how these diseases are classified. Is it enough to define a disease by how it affects the patient? Should it be defined by the molecular change or by the genetic mutation itself? How do co-mutations, mutation type, or the concept of oligo-genetic inheritance impact on cilial function?
For this renal geneticist, deciding between podocytopathies and ciliopathies should have been simple – choose the multi-system disease group where research is expanding scientific knowledge.
Can someone explain to me why the podocytes won?
Post by Cathy Quinlan follower her @KidneyCathy
**This post is not actually from the president of the world ciliopathy society. This is a parody in the spirit of NephMadnes
Sunday, March 26, 2017
Thursday, March 23, 2017
#NephMadness 2017: The Gut Microbiota and Kidney Disease- Will it Survive the Hype? #NutritionRegion
I was very excited to see delightful topics in the Nutrition Region of this year’s #NephMadness, especially the Gut Microbiome and Kidney Disease. Before starting my Ph.D., I was aware that the colonic microbiota existed, but I acquired a very different perspective by being in contact with many researchers investigating the effects of our microbial friends in animal models of certain diseases (e.g., obesity, inflammatory bowel disease, and menopause), but also in humans (e.g., changes throughout the life cycle, autism-spectrum disorder, effects of exercise). I began to read about the topic and was amazed by the data linking metabolites of microbial origin and kidney disease progression, cardiovascular disease, mineral and bone disorder, and mortality.
Despite all of the aforementioned convincing studies, data on the gut microbiota structure (what microbes are there?) and their function (what are they doing?) is very scarce among patients with chronic kidney disease (CKD) and end-stage kidney disease (ESKD). In 2013, Vaziri et al. showed that the bacterial species richness is decreased in patients undergoing hemodialysis (HD). Specifically, bacterial families that have been traditionally associated with positive outcomes, such as Lactobacillaceae and Prevotellaceae, were decreased. Also, it was revealed that bacterial families that have been associated with detrimental effects are enriched in hemodialysis (HD) patients. Then, the same group later showed in an in silico analysis that bacterial families that possess the enzymes needed for two of the most famous bacteria-derived uremic toxins (indoxyl sulfate and p-cresyl sulfate, which are derived from the fermentation of tryptophan and tyrosine, respectively) are enriched in the microbiota of HD patients. In 2016, in a very elegant study, Devlin et al. showed that by knocking out the tryptophanase gene in Bacteroides thetaiotaomicron, the production of indoxyl sulfate was eliminated in mice.
These studies are remarkable, but how can we modulate the presence/absence of specific bacteria in CKD and ESKD? Several studies have demonstrated that fermentable dietary fiber (bacteria’s favorite food), may be beneficial. Bacteria that have been traditionally considered beneficial, degrades these carbohydrates. Meijers et al. supplemented 20g of oligofructose-enriched inulin (the adequate intake of fiber recommended for healthy females and males is 25g/d and 38g/d, respectively) to HD patients and found out that after four weeks of treatment, the levels of p-cresyl sulfate were reduced by 20%, but there was no change in indoxyl sulfate. Poesen et al., similarly supplemented 20g of arabinoxylans and found a small decrease in trimethylamine N-oxide (TMAO), another unwanted bacteria-derived metabolite, but not p-cresyl sulfate or indoxyl sulfate. Other researchers have used synbiotics (pro + prebiotics) with the thought that, by providing “beneficial” bacteria and the food for these bacteria, a shift in the microbiota would occur. Rossi et al. supplemented 15g/d of a mixture of fermentable dietary fibers (inulin, fructooligosaccharides, and galactooligosaccharides) and 90 billion CFU probiotic strains/d from the Bifidobacterium, Lactobacillus, and Streptococcus genera to CKD patients. The authors concluded that the synbiotic decreased p-cresyl sulfate, but not indoxyl sulfate. In addition, it was revealed that there was an increase in the relative abundance of Bifidobacterium and a decrease in Ruminococcaceae. Given these findings, the supplementation of prebiotics and synbiotics has resulted in certain positive outcomes; however, these results have been inconsistent.
Therefore, what should researchers do next? In my opinion, we should be looking into what patients are eating, instead of just supplementing them. Diet is one of the main determinants of the gut microbiota. CKD and ESKD patients have very distinctive diets characterized by a restriction of dietary phosphorus, sodium, and potassium. This approach may lead patients to limit their intake of foods that are high in dietary fiber, such as fruits, vegetables, legumes, whole grains, and nuts. These food groups additionally contain other compounds, such as phytochemicals, which may also affect the gut microbiota. To date, however, no studies are assessing the effects of the traditionally restrictive renal diet in comparison to a more “liberal” diet on the gut microbiota structure and function of CKD and ESRD patients.
In conclusion, will the gut microbiome in kidney disease survive the hype? In my opinion it WILL. There are several ongoing studies and many studies to be performed since we already know that metabolites that are produced by our microbial friends (or enemies?) affect the progression of kidney disease in addition to outcomes in this population. Additionally, newly high throughput technologies will enable us to perform it into more detail, not only to find out who is there, but also what they are doing and how are they doing it.
Annabel Biruete
Ph.D. student in Nutritional Sciences at the University of Illinois at Urbana-Champaign
#NSMC intern
follow her @anniebelch
Despite all of the aforementioned convincing studies, data on the gut microbiota structure (what microbes are there?) and their function (what are they doing?) is very scarce among patients with chronic kidney disease (CKD) and end-stage kidney disease (ESKD). In 2013, Vaziri et al. showed that the bacterial species richness is decreased in patients undergoing hemodialysis (HD). Specifically, bacterial families that have been traditionally associated with positive outcomes, such as Lactobacillaceae and Prevotellaceae, were decreased. Also, it was revealed that bacterial families that have been associated with detrimental effects are enriched in hemodialysis (HD) patients. Then, the same group later showed in an in silico analysis that bacterial families that possess the enzymes needed for two of the most famous bacteria-derived uremic toxins (indoxyl sulfate and p-cresyl sulfate, which are derived from the fermentation of tryptophan and tyrosine, respectively) are enriched in the microbiota of HD patients. In 2016, in a very elegant study, Devlin et al. showed that by knocking out the tryptophanase gene in Bacteroides thetaiotaomicron, the production of indoxyl sulfate was eliminated in mice.
These studies are remarkable, but how can we modulate the presence/absence of specific bacteria in CKD and ESKD? Several studies have demonstrated that fermentable dietary fiber (bacteria’s favorite food), may be beneficial. Bacteria that have been traditionally considered beneficial, degrades these carbohydrates. Meijers et al. supplemented 20g of oligofructose-enriched inulin (the adequate intake of fiber recommended for healthy females and males is 25g/d and 38g/d, respectively) to HD patients and found out that after four weeks of treatment, the levels of p-cresyl sulfate were reduced by 20%, but there was no change in indoxyl sulfate. Poesen et al., similarly supplemented 20g of arabinoxylans and found a small decrease in trimethylamine N-oxide (TMAO), another unwanted bacteria-derived metabolite, but not p-cresyl sulfate or indoxyl sulfate. Other researchers have used synbiotics (pro + prebiotics) with the thought that, by providing “beneficial” bacteria and the food for these bacteria, a shift in the microbiota would occur. Rossi et al. supplemented 15g/d of a mixture of fermentable dietary fibers (inulin, fructooligosaccharides, and galactooligosaccharides) and 90 billion CFU probiotic strains/d from the Bifidobacterium, Lactobacillus, and Streptococcus genera to CKD patients. The authors concluded that the synbiotic decreased p-cresyl sulfate, but not indoxyl sulfate. In addition, it was revealed that there was an increase in the relative abundance of Bifidobacterium and a decrease in Ruminococcaceae. Given these findings, the supplementation of prebiotics and synbiotics has resulted in certain positive outcomes; however, these results have been inconsistent.
Therefore, what should researchers do next? In my opinion, we should be looking into what patients are eating, instead of just supplementing them. Diet is one of the main determinants of the gut microbiota. CKD and ESKD patients have very distinctive diets characterized by a restriction of dietary phosphorus, sodium, and potassium. This approach may lead patients to limit their intake of foods that are high in dietary fiber, such as fruits, vegetables, legumes, whole grains, and nuts. These food groups additionally contain other compounds, such as phytochemicals, which may also affect the gut microbiota. To date, however, no studies are assessing the effects of the traditionally restrictive renal diet in comparison to a more “liberal” diet on the gut microbiota structure and function of CKD and ESRD patients.
In conclusion, will the gut microbiome in kidney disease survive the hype? In my opinion it WILL. There are several ongoing studies and many studies to be performed since we already know that metabolites that are produced by our microbial friends (or enemies?) affect the progression of kidney disease in addition to outcomes in this population. Additionally, newly high throughput technologies will enable us to perform it into more detail, not only to find out who is there, but also what they are doing and how are they doing it.
Annabel Biruete
Ph.D. student in Nutritional Sciences at the University of Illinois at Urbana-Champaign
#NSMC intern
follow her @anniebelch
Tuesday, March 21, 2017
Attention Fellows: Attend the Origins of Renal Physiology Fellows Course 2017
The National Course for Renal Fellows: Origins of Renal Physiology (August 27 – September 3, 2017), is filling up fast.
This 1 week course provides a strong foundation in renal physiology for future renal investigators, teachers and clinicians.
Join 28 of your colleagues from around the country at the Mount Desert Island Biological Laboratories for this highly rated, transformational course.
Origins of Renal Physiology is entirely unique among national renal short courses. The course provides participants with research tools that give them a deeper understanding of concepts of physiological homeostasis which is difficult to attain during normal clinical training schedules. In this course, trainees will perform experiments involving both classical physiological models, as well as modern reductionist approaches and confocal microscopy to follow trafficking of transporter proteins in cultured cells. In addition to the curriculum itself, fellows will benefit from close interactions with senior investigators in renal physiology, who will guide them through the performance of the experiments, share meals with them in the dining room, and take the time to discuss their career goals with them. In addition, fellows will benefit enormously by working closely with other fellows from different programs, and sharing their insights into renal research. The course is organized around several laboratory modules and one enrichment module in Responsible Conduct of Research. Participants will complete three of the rotations over the six-day course. The first day of each rotation involves intensive experimental work, and the second day involves analysis and presentation of the work to the entire conference group.
Apply here.
Note: This is a fantastic opportunity. Don't even think twice about it. SIGN UP and GO!!! I would go back in a heartbeat. Matt Sparks (2008 Alum)
This 1 week course provides a strong foundation in renal physiology for future renal investigators, teachers and clinicians.
Join 28 of your colleagues from around the country at the Mount Desert Island Biological Laboratories for this highly rated, transformational course.
Origins of Renal Physiology is entirely unique among national renal short courses. The course provides participants with research tools that give them a deeper understanding of concepts of physiological homeostasis which is difficult to attain during normal clinical training schedules. In this course, trainees will perform experiments involving both classical physiological models, as well as modern reductionist approaches and confocal microscopy to follow trafficking of transporter proteins in cultured cells. In addition to the curriculum itself, fellows will benefit from close interactions with senior investigators in renal physiology, who will guide them through the performance of the experiments, share meals with them in the dining room, and take the time to discuss their career goals with them. In addition, fellows will benefit enormously by working closely with other fellows from different programs, and sharing their insights into renal research. The course is organized around several laboratory modules and one enrichment module in Responsible Conduct of Research. Participants will complete three of the rotations over the six-day course. The first day of each rotation involves intensive experimental work, and the second day involves analysis and presentation of the work to the entire conference group.
Apply here.
Note: This is a fantastic opportunity. Don't even think twice about it. SIGN UP and GO!!! I would go back in a heartbeat. Matt Sparks (2008 Alum)
Wednesday, March 15, 2017
Lupus Podocytopathy
I
recently finished my 2nd month on the consult service which was a
very exciting time for me because I saw patients with every class of Lupus with
different kinds of presentations. It was especially rewarding because I
biopsied majority of these patients myself and then followed their course
through diagnosis, initiation of immunosuppression and witnessed improvement in
subsequent clinic visits. I find Lupus Nephritis most fascinating among all the
GNs.
One
of the most interesting cases I saw since the beginning of fellowship was of a
36 yrs. old woman who presented with joint pain, malar rash, photosensitivity,
worsening generalized edema and nephrotic range proteinuria of 8 grams. She had
2 prior renal biopsies- one with a diagnosis of Minimal Change Disease and the
second one 2 years ago with FSGS tip lesion and Class 2 lupus Nephritis.
On
her current presentation, she met the ACR criteria of diagnosis of SLE. We
biopsied her again and essentially found the exact same lesion- FSGS tip lesion
with Class 2 lupus nephritis. There were
only scant mesangial deposits, no endocapillary proliferation or necrosis and
weak but full house staining on IM. EM showed diffuse foot process effacement.
We diagnosed her with Lupus Podocytopathy and she was started on high dose
steroids and immunosuppression with MMF with subsequent rapid resolution of
symptoms and proteinuria to 0.8 grams within 2 weeks. It remains to be seen how
she continues to respond to the treatment and if she remains in remission. She
still is likely to relapse in future and switch to a different class of lupus
nephritis along her course.
Podocytopathy
is a glomerular disease which occurs due to extrinsic or intrinsic primary
podocyte injury. Lupus Podocytopathy occurs in association with new or relapse
of SLE signs and symptoms.
It
is a rare presentation of Lupus Nephritis - the reported incidence is 1.33% of patients
with Lupus Nephritis. So far there have been 22 reported cases in literature.
Up until the early 2000s, nephrotic syndrome in a patient with class 2 lupus
was deemed as a coincidence. The work of
Dube et al,
Hertig et al and Kraft et al lead to an understanding that the appearance
of nephrotic syndrome in a patient with Class 2 lupus (without any
endocapillary proliferation or GBM deposits) coincided with Lupus flare or
appearance of Lupus symptoms. Among these patients, the nephrotic syndrome
appears best correlated with podocytopathy rather than subepithelial electron
dense deposits, mesangial deposits, or mesangial hypercellularity. The
currently used ISN/RPS classification of Lupus Nephritis does not include Lupus
Podocytopathy.
A
more recent article in CJASN in April 2016 studied
a cohort of 50 Chinese SLE patients (the largest so far) with diffuse Foot
Process Effacement and class 1 and 2 lupus nephritis. They included minimal change disease (MCD) in 13 cases, mesangial
proliferation in 28 cases, and FSGS in nine cases.They have proposed a list of criteria to
diagnose Lupus Podocytopathy and suggest revision of ISN/RPS classification of
Lupus nephritis to include Lupus podocytopathy as a distinct entity. The
immunologic and molecular mechanism of Lupus podocytopathy has not yet been
fully studied but the T-cell abnormalities in both the disorders could be the
unifying pathogenic mechanism in the occurrence of MCD or FSGS in SLE.
There
is very limited data currently on the treatment of this group of patients as
almost all of it comes from observational studies. But so far, we know that
patients with Lupus Podocytopathy are highly steroid responsive. Those who have
an FSGS lesion are prone to more relapses and incomplete remission as compared
to the ones with MCD, and also need immunosuppressive agents with steroids. Both
nephrologists and renal pathologists need to be aware of this entity as a cause
of nephrotic syndrome in patients with SLE
Posted by Manasi Bapat, Nephrology Fellow, Mount Sinai Hospital, NY
Labels:
lupus nephritis,
Manasi Bapat,
podocyte biology
Tuesday, March 14, 2017
PPIs and CKD association present after exclusion of AKI
It was previously thought that AKI events were largely driving the association seen between PPI use and CKD.
A recent study from Xie et al in Kidney International aimed to examine the relationship between PPI use and renal outcomes over five years in those without AKI.
Methods: The researchers gathered a cohort of 144,032 veterans (125,000+ new to PPIs and 18,000+ new to H2 blockers). They then created survival models with Kaplan Meier curves to show survival probability for their four renal outcomes: incident eGFR < 60 ml/min/m2, incident CKD, eGFR decrease >30%, and ESRD or >50% decrease in eGFR. Participants were censored at the time of AKI. All efforts were made to exclude subjects with AKI, even before cohort entry. Of note, AKI was defined in four different ways, but the researchers were not able to detect unrecognized AKI (i.e., outpatient AKI that occurs and resolves between lab checks). Covariates used in their multivariate logistic regression model included numerous co-morbidities, medication use such as NSAIDs or ACEI/ARBs, and patient characteristics such as age, race, and BMI.
Results:
New PPI users had an increased risk of
- all renal outcomes compared to users of H2 blockers including eGFR < 60 ml/min/m2 with a hazard ratio of 1.19 (95% CI 1.15-1.24)
- incident CKD with a HR of 1.26 (95% CI 1.20-1.33)
- eGFR decline >30% with a HR of 1.22 (95% CI 1.16-1.28)
- ESRD or >50% decrease in eGFR with a HR of 1.30 (95% CI 1.15-1.48).
Discussion: The researchers conclude their data suggest a true association between PPI use and CKD even in those patients that do not develop an AKI along the way. Besides AKI, other possible, underdeveloped explanations for the observed relationship between CKD and PPIs include altered gut microbiome; reduced cell regeneration; upregulated heme oxygenase-1; and increased oxidative stress. The researchers conclude that further investigation is needed and that caution should be applied when considering long term PPI use as well as monitoring kidney function in PPI users.
Personal reflection: Observational data from two cohorts (ARIC participants and veterans) analyzed by two research groups (Lazarus et al and Xie et al) show an association between PPIs and CKD. While this work is not based on randomized controlled trial data nor has it been replicated numerous times over by several different investigators, it is noteworthy. Yet, association is not causality. Should clinical practice change? And to what degree should it change given the many other considerations that can influence renal function including diabetes and hypertension? While we wait for more evidence, my practice has been to discuss PPI use with my patients and encourage alternatives when possible if no clear indication for the medication exists. This is stems from the above information as well as an effort to reduce pill burden and improve medication compliance. Specifically, I ask patients to discuss PPI use with their primary care doctors (or whichever provider started the medication) and suggest the following: weaning down and then off of the medication; avoiding known food triggers; and using H2 blockers as needed.
Melissa Makar, Nephrology Fellow, Duke
Tuesday, March 7, 2017
Time for #NephMadness 2017
NephMadness 2017 has 32 nephrology concepts
divided across 8 different topic areas, called regions. Each region has
4 concepts which compete against each other in a single elimination
tournament. We have selected content experts from each topic to help us
determine the best concepts and vet the information we provide to make
sure it is accurate, unbiased, and interesting. The selection committee
includes:
- Biomedical Research: Benjamin D. Humphreys | @HumphreysLab
- Diabetic Nephropathy Region: Anna Burgner | @annaburgner
- Dialysis Region: Jonathan Himmelfarb | @xpotasn
- Disparities Region: L. Ebony Boulware | @ebonyboulware
- Genetics Region: Matthew G. Sampson | @kidneyomicsamps
- Glomerulonephritis Region: Richard J. Glassock
- History Region: Neil Turner | @neilturn
- Nutrition Region: Kamyar Kalantar-Zadeh | @kamyarkalantarz
Click here to fill out your brackets
Prize Categories
- Top score
- Top Med Student score
- Top Resident score
- Top Fellow score
- Top Attending score
- Best Tweeter
- Best Blogger
Prize Update: In addition to the above categories we will be awarding a Group Prize
to the group that has the most individuals affiliated with it. To be
eligible for this prize, you will be prompted during bracket submission
to indicate your group (for example, your affiliation with a
particular Fellowship Program/Residency Program/Group Practice/Medical
School etc). Please note we will only accept one group affiliation per
entry. We hope to encourage a little friendly competition between rival
programs, so make sure to get as many people from your program to
participate in NephMadness 2017!
Details available here.
Schedule
- March 7: Bracket entry opens
- March 24: Deadline for entering contest
- March 26: First round results | Saturated 16 named
- March 29: Saturated 16 results |Effluent 8 named
- March 31, Friday: Effluent 8 results |Filtered 4 named
- April 3: Filtered Four results | Finalists named
- April 5: NephMadness 2017 Champion crowned
Follow the AJKD NephMadness Team (listed below) on Twitter, engage away, and get a head start on claiming the Best Tweeter prize!
- Joel Topf @kidney_boy
- Matt Sparks @Nephro_Sparks
- Tim Yau @Maximal_Change
- Silvi Shah @silvishah
- Anna Burgner @anna_burgner
- Edgar Lerma @edgarvlermamd
- Paul Phelan @paulphel
- Warren Kupin @wkupin
- Swapnil Hiremath @hswapnil
- Nikhil Shah @dr_nikhilshah
- Kenar Jhaveri @kdjhaveri
- Brian Stotter @StotterMD
Thursday, March 2, 2017
Dialyzing a patient with an intracranial hemorrhage
Patients with intracranial hemorrhages often develop cerebral edema, which can create unique challenges when providing maintenance hemodialysis. Conall also covering this on RFN a few years back. Hemodialysis can worsen cerebral edema through a rapid decrease in serum osmolarity (urea is rapidly cleared from the blood by the dialyzer but urea transport across brain cell membranes lags behind). As a result, a fairly rapid increase in brain water content develops. Besides worsening cerebral edema, maintenance hemodialysis can also reduce cerebral perfusion if systemic hypotension occurs during dialysis. For these reasons, patients either require continuous renal replacement therapy or modified hemodialysis as outlined below. To reduce the risk of worsening cerebral edema, hemodialysis should be modified to include
Melissa Makar, Nephrology Fellow, Duke
- small dialyzers
- slower blood flow rates
- slower dialysate flow rates
- reduced dialysis times
- increase the dialysate sodium concentration (consider setting it to 5-10 mEq/L higher than serum sodium).
- Lower the dialysate bicarbonate concentration (consider setting it to 30-32 mEq/L)
- avoiding intracellular acidosis
- subsequent increased intracellular osmolarity
- cell swelling
- cooling dialysate temperatures to reduce risk of hypotension
- avoiding heparin administration.
Melissa Makar, Nephrology Fellow, Duke
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